At what time do disables raids and hacks go back up on enemy ships?

are you talking about the actions counters?
those go down 24 hrs after each of their disables, raids, and hacks....
and those go up 24 hrs after each time someone else has disabled, raided, and hacked them

ooooook so there isnt one specific time these all go back up

nope.. in fact if they've been hit enough times, you might eventually see them drop into the negatives before slowly levelling off at 3/5/5 again